Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Ntng1-201ENSMUST00000051253 327 ntBASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shank3Q4ACU6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Gm9550-201ENSMUST00000161130 862 ntBASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Gm19187-201ENSMUST00000206781 892 ntBASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shank3Q4ACU6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Mir6958-201ENSMUST00000184207 73 ntBASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Gm32999-201ENSMUST00000192693 562 ntBASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Gm18730-201ENSMUST00000218038 343 ntBASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Gm45925-201ENSMUST00000218882 744 ntBASIC16.25■□□□□ 0.19
Shank3Q4ACU6 AC163667.3-201ENSMUST00000225774 222 ntBASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shank3Q4ACU6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.24■□□□□ 0.19
Shank3Q4ACU6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Gm8194-201ENSMUST00000159783 859 ntBASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shank3Q4ACU6 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.23■□□□□ 0.19
Shank3Q4ACU6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.23■□□□□ 0.19
Shank3Q4ACU6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shank3Q4ACU6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shank3Q4ACU6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.23■□□□□ 0.19
Shank3Q4ACU6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms