Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Gm11478-201ENSMUST00000117851 599 ntBASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Gm13612-201ENSMUST00000119276 390 ntBASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Gm8598-201ENSMUST00000221184 836 ntBASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Itm2b-204ENSMUST00000228637 783 ntBASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.11□□□□□ -0.15
Nlrc4Q3UP24 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Gm6447-201ENSMUST00000118905 835 ntBASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Mir1894-201ENSMUST00000122802 81 ntBASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nlrc4Q3UP24 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms