Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Limch1Q3UH68 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.79■□□□□ 0.12
Limch1Q3UH68 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gm27772-201ENSMUST00000184900 187 ntBASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.79■□□□□ 0.12
Limch1Q3UH68 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.79■□□□□ 0.12
Limch1Q3UH68 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.79■□□□□ 0.12
Limch1Q3UH68 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gm9899-201ENSMUST00000065519 555 ntBASIC15.79■□□□□ 0.12
Limch1Q3UH68 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Limch1Q3UH68 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.78■□□□□ 0.12
Limch1Q3UH68 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.78■□□□□ 0.12
Limch1Q3UH68 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Gm17795-201ENSMUST00000214505 757 ntBASIC15.78■□□□□ 0.12
Limch1Q3UH68 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.78■□□□□ 0.12
Limch1Q3UH68 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.78■□□□□ 0.12
Limch1Q3UH68 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.78■□□□□ 0.12
Limch1Q3UH68 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Limch1Q3UH68 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Limch1Q3UH68 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Limch1Q3UH68 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Limch1Q3UH68 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Limch1Q3UH68 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.77■□□□□ 0.11
Limch1Q3UH68 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Limch1Q3UH68 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Limch1Q3UH68 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.77■□□□□ 0.11
Limch1Q3UH68 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Limch1Q3UH68 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Limch1Q3UH68 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Limch1Q3UH68 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
Limch1Q3UH68 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms