Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brf2Q3UAW9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Syt7-204ENSMUST00000223586 1344 ntBASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Mir874-201ENSMUST00000104769 76 ntBASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Brf2Q3UAW9 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Gm15321-201ENSMUST00000121290 288 ntBASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Gm5161-201ENSMUST00000075243 853 ntBASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brf2Q3UAW9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms