Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.69■□□□□ 0.1
Col5a2Q3U962 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.69■□□□□ 0.1
Col5a2Q3U962 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Gm14704-201ENSMUST00000120300 874 ntBASIC15.68■□□□□ 0.1
Col5a2Q3U962 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.68■□□□□ 0.1
Col5a2Q3U962 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Gm10752-201ENSMUST00000218348 729 ntBASIC15.68■□□□□ 0.1
Col5a2Q3U962 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.68■□□□□ 0.1
Col5a2Q3U962 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Daam2-202ENSMUST00000224595 1926 ntBASIC15.68■□□□□ 0.1
Col5a2Q3U962 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col5a2Q3U962 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.68■□□□□ 0.1
Col5a2Q3U962 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col5a2Q3U962 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Gm24749-201ENSMUST00000157838 343 ntBASIC15.67■□□□□ 0.1
Col5a2Q3U962 Gm3508-201ENSMUST00000186012 792 ntBASIC15.67■□□□□ 0.1
Col5a2Q3U962 Gm9555-201ENSMUST00000200908 583 ntBASIC15.67■□□□□ 0.1
Col5a2Q3U962 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col5a2Q3U962 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.66■□□□□ 0.1
Col5a2Q3U962 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col5a2Q3U962 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm13736-201ENSMUST00000119272 253 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm13492-201ENSMUST00000119772 665 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm17040-202ENSMUST00000170597 889 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm7848-201ENSMUST00000210739 718 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Col5a2Q3U962 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms