Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trappc13Q3TIR1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trappc13Q3TIR1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trappc13Q3TIR1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trappc13Q3TIR1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trappc13Q3TIR1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trappc13Q3TIR1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trappc13Q3TIR1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trappc13Q3TIR1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Mir874-201ENSMUST00000104769 76 ntBASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm15678-201ENSMUST00000117573 960 ntBASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trappc13Q3TIR1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Gm27306-201ENSMUST00000183970 107 ntBASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Gm17330-201ENSMUST00000221047 165 ntBASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms