Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Khdc4Q3TCX3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc4Q3TCX3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Khdc4Q3TCX3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Khdc4Q3TCX3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Gm2445-201ENSMUST00000182798 989 ntBASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Gm45841-201ENSMUST00000207700 164 ntBASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Khdc4Q3TCX3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm12928-201ENSMUST00000117115 573 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm24420-201ENSMUST00000176676 59 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm2495-201ENSMUST00000191160 466 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Khdc4Q3TCX3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Gm12957-201ENSMUST00000117835 377 ntBASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.75□□□□□ -0.37
Khdc4Q3TCX3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms