Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccbe1Q3MI99 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Gm15173-201ENSMUST00000122049 433 ntBASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccbe1Q3MI99 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Gm13418-201ENSMUST00000119097 944 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Gm12260-201ENSMUST00000122447 411 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Gm27702-201ENSMUST00000184512 56 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Gm15590-201ENSMUST00000078419 552 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccbe1Q3MI99 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccbe1Q3MI99 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccbe1Q3MI99 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccbe1Q3MI99 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccbe1Q3MI99 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccbe1Q3MI99 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.1□□□□□ -0.47
Ccbe1Q3MI99 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.1□□□□□ -0.47
Ccbe1Q3MI99 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccbe1Q3MI99 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms