Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.99□□□□□ -0.65
Trim63Q38HM4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.99□□□□□ -0.65
Trim63Q38HM4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.99□□□□□ -0.65
Trim63Q38HM4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trim63Q38HM4 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.98□□□□□ -0.65
Trim63Q38HM4 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Gm13464-201ENSMUST00000119418 935 ntBASIC10.98□□□□□ -0.65
Trim63Q38HM4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.98□□□□□ -0.65
Trim63Q38HM4 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.98□□□□□ -0.65
Trim63Q38HM4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Trim63Q38HM4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim63Q38HM4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.97□□□□□ -0.65
Trim63Q38HM4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.97□□□□□ -0.65
Trim63Q38HM4 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.97□□□□□ -0.65
Trim63Q38HM4 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.97□□□□□ -0.65
Trim63Q38HM4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Gm18622-201ENSMUST00000219361 595 ntBASIC10.97□□□□□ -0.65
Trim63Q38HM4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.97□□□□□ -0.65
Trim63Q38HM4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms