Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Dupd1-202ENSMUST00000224735 548 ntBASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ptchd3Q0EEE2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ptchd3Q0EEE2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 AA543401-201ENSMUST00000164248 1269 ntBASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Gm28630-201ENSMUST00000187806 498 ntBASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Gm5867-201ENSMUST00000063197 592 ntBASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ptchd3Q0EEE2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Gm15693-201ENSMUST00000120470 637 ntBASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Mir1897-201ENSMUST00000122581 272 ntBASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Gm27430-201ENSMUST00000184585 107 ntBASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Gm44333-201ENSMUST00000197168 107 ntBASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ptchd3Q0EEE2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms