Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm13182-201ENSMUST00000122241 312 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm5616-201ENSMUST00000165252 384 ntBASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm8741-201ENSMUST00000174736 384 ntBASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm40879-201ENSMUST00000220759 612 ntBASIC11.87□□□□□ -0.51
Chd8Q09XV5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.87□□□□□ -0.51
Chd8Q09XV5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Mir1956-201ENSMUST00000157748 65 ntBASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm22388-201ENSMUST00000158194 248 ntBASIC11.87□□□□□ -0.51
Chd8Q09XV5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.87□□□□□ -0.51
Chd8Q09XV5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chd8Q09XV5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.86□□□□□ -0.51
Chd8Q09XV5 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Gm18038-201ENSMUST00000197900 485 ntBASIC11.86□□□□□ -0.51
Chd8Q09XV5 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.86□□□□□ -0.51
Chd8Q09XV5 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.86□□□□□ -0.51
Chd8Q09XV5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Gm22146-201ENSMUST00000157397 288 ntBASIC11.86□□□□□ -0.51
Chd8Q09XV5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Mir497b-201ENSMUST00000093601 125 ntBASIC11.86□□□□□ -0.51
Chd8Q09XV5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chd8Q09XV5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chd8Q09XV5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms