Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Gm25261-201ENSMUST00000157416 134 ntBASIC12.84□□□□□ -0.35
Hoxc4Q08624 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.84□□□□□ -0.35
Hoxc4Q08624 Gm37008-201ENSMUST00000195712 319 ntBASIC12.84□□□□□ -0.35
Hoxc4Q08624 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.84□□□□□ -0.35
Hoxc4Q08624 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc4Q08624 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Hoxc4Q08624 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hoxc4Q08624 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Hoxc4Q08624 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Mir686-201ENSMUST00000102174 109 ntBASIC12.83□□□□□ -0.36
Hoxc4Q08624 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Gm26185-201ENSMUST00000157692 266 ntBASIC12.83□□□□□ -0.36
Hoxc4Q08624 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Gm38002-201ENSMUST00000193255 180 ntBASIC12.83□□□□□ -0.36
Hoxc4Q08624 Gm45331-201ENSMUST00000209868 554 ntBASIC12.83□□□□□ -0.36
Hoxc4Q08624 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Gm6013-201ENSMUST00000212264 699 ntBASIC12.83□□□□□ -0.36
Hoxc4Q08624 Gm19163-201ENSMUST00000223313 780 ntBASIC12.83□□□□□ -0.36
Hoxc4Q08624 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.83□□□□□ -0.36
Hoxc4Q08624 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.83□□□□□ -0.36
Hoxc4Q08624 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Hoxc4Q08624 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.82□□□□□ -0.36
Hoxc4Q08624 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Gm22018-201ENSMUST00000104357 131 ntBASIC12.82□□□□□ -0.36
Hoxc4Q08624 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.82□□□□□ -0.36
Hoxc4Q08624 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Gm27572-201ENSMUST00000183702 255 ntBASIC12.82□□□□□ -0.36
Hoxc4Q08624 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc4Q08624 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms