Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ebf1Q07802 Gm5687-201ENSMUST00000118252 640 ntBASIC13.59□□□□□ -0.23
Ebf1Q07802 Gm8810-201ENSMUST00000172895 754 ntBASIC13.59□□□□□ -0.23
Ebf1Q07802 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Ebf1Q07802 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.59□□□□□ -0.23
Ebf1Q07802 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Ebf1Q07802 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Ebf1Q07802 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ebf1Q07802 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ebf1Q07802 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf1Q07802 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Ebf1Q07802 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf1Q07802 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.58□□□□□ -0.23
Ebf1Q07802 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf1Q07802 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ebf1Q07802 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Gm19184-201ENSMUST00000196798 928 ntBASIC13.58□□□□□ -0.24
Ebf1Q07802 Gm29705-201ENSMUST00000212598 474 ntBASIC13.58□□□□□ -0.24
Ebf1Q07802 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.58□□□□□ -0.24
Ebf1Q07802 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.58□□□□□ -0.24
Ebf1Q07802 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.58□□□□□ -0.24
Ebf1Q07802 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf1Q07802 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.57□□□□□ -0.24
Ebf1Q07802 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ebf1Q07802 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ebf1Q07802 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ebf1Q07802 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.57□□□□□ -0.24
Ebf1Q07802 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.57□□□□□ -0.24
Ebf1Q07802 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.57□□□□□ -0.24
Ebf1Q07802 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Gm45880-201ENSMUST00000213041 853 ntBASIC13.57□□□□□ -0.24
Ebf1Q07802 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.57□□□□□ -0.24
Ebf1Q07802 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.57□□□□□ -0.24
Ebf1Q07802 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ebf1Q07802 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ebf1Q07802 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ebf1Q07802 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.57□□□□□ -0.24
Ebf1Q07802 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ebf1Q07802 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms