Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm29608-201ENSMUST00000190444 463 ntBASIC12.38□□□□□ -0.43
Col10a1Q05306 Gm38223-201ENSMUST00000194484 695 ntBASIC12.38□□□□□ -0.43
Col10a1Q05306 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Gm9908-201ENSMUST00000211534 448 ntBASIC12.38□□□□□ -0.43
Col10a1Q05306 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.38□□□□□ -0.43
Col10a1Q05306 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.38□□□□□ -0.43
Col10a1Q05306 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col10a1Q05306 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.37□□□□□ -0.43
Col10a1Q05306 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col10a1Q05306 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col10a1Q05306 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col10a1Q05306 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Col10a1Q05306 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.37□□□□□ -0.43
Col10a1Q05306 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col10a1Q05306 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.37□□□□□ -0.43
Col10a1Q05306 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col10a1Q05306 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col10a1Q05306 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.37□□□□□ -0.43
Col10a1Q05306 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col10a1Q05306 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.37□□□□□ -0.43
Col10a1Q05306 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col10a1Q05306 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.36□□□□□ -0.43
Col10a1Q05306 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col10a1Q05306 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Gm38144-201ENSMUST00000192790 465 ntBASIC12.36□□□□□ -0.43
Col10a1Q05306 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.36□□□□□ -0.43
Col10a1Q05306 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.36□□□□□ -0.43
Col10a1Q05306 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col10a1Q05306 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col10a1Q05306 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.36□□□□□ -0.43
Col10a1Q05306 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col10a1Q05306 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col10a1Q05306 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms