Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col6a2Q02788 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a2Q02788 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.38□□□□□ -0.27
Col6a2Q02788 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col6a2Q02788 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a2Q02788 Gm22331-201ENSMUST00000158066 136 ntBASIC13.38□□□□□ -0.27
Col6a2Q02788 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col6a2Q02788 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.38□□□□□ -0.27
Col6a2Q02788 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.38□□□□□ -0.27
Col6a2Q02788 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col6a2Q02788 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a2Q02788 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Col6a2Q02788 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a2Q02788 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Col6a2Q02788 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Col6a2Q02788 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col6a2Q02788 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col6a2Q02788 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Gm5687-201ENSMUST00000118252 640 ntBASIC13.37□□□□□ -0.27
Col6a2Q02788 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a2Q02788 Gm24644-201ENSMUST00000157114 139 ntBASIC13.37□□□□□ -0.27
Col6a2Q02788 Proscos-202ENSMUST00000178990 666 ntBASIC13.37□□□□□ -0.27
Col6a2Q02788 Gm24196-201ENSMUST00000179161 110 ntBASIC13.37□□□□□ -0.27
Col6a2Q02788 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.37□□□□□ -0.27
Col6a2Q02788 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a2Q02788 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.37□□□□□ -0.27
Col6a2Q02788 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.37□□□□□ -0.27
Col6a2Q02788 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.37□□□□□ -0.27
Col6a2Q02788 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col6a2Q02788 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.37□□□□□ -0.27
Col6a2Q02788 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col6a2Q02788 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a2Q02788 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col6a2Q02788 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.36□□□□□ -0.27
Col6a2Q02788 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms