Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Scn1bP97952 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn1bP97952 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn1bP97952 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.24□□□□□ -0.45
Scn1bP97952 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1bP97952 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Scn1bP97952 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn1bP97952 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn1bP97952 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Scn1bP97952 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scn1bP97952 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.23□□□□□ -0.45
Scn1bP97952 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Gm5479-201ENSMUST00000160578 435 ntBASIC12.23□□□□□ -0.45
Scn1bP97952 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Scn1bP97952 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Scn1bP97952 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn1bP97952 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn1bP97952 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.23□□□□□ -0.45
Scn1bP97952 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.23□□□□□ -0.45
Scn1bP97952 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Scn1bP97952 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Scn1bP97952 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Scn1bP97952 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.23□□□□□ -0.45
Scn1bP97952 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1bP97952 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Scn1bP97952 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.22□□□□□ -0.45
Scn1bP97952 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.22□□□□□ -0.45
Scn1bP97952 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.22□□□□□ -0.45
Scn1bP97952 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.22□□□□□ -0.45
Scn1bP97952 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.22□□□□□ -0.45
Scn1bP97952 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Scn1bP97952 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.22□□□□□ -0.45
Scn1bP97952 Gm44492-201ENSMUST00000197012 141 ntBASIC12.22□□□□□ -0.45
Scn1bP97952 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.22□□□□□ -0.45
Scn1bP97952 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.22□□□□□ -0.45
Scn1bP97952 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1bP97952 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms