Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nkx3-2P97503 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.69□□□□□ -0.38
Nkx3-2P97503 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx3-2P97503 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.68□□□□□ -0.38
Nkx3-2P97503 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.68□□□□□ -0.38
Nkx3-2P97503 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.68□□□□□ -0.38
Nkx3-2P97503 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Gm13689-201ENSMUST00000119360 685 ntBASIC12.68□□□□□ -0.38
Nkx3-2P97503 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Gm27486-201ENSMUST00000184923 80 ntBASIC12.68□□□□□ -0.38
Nkx3-2P97503 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx3-2P97503 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Gm43438-201ENSMUST00000198133 379 ntBASIC12.67□□□□□ -0.38
Nkx3-2P97503 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.67□□□□□ -0.38
Nkx3-2P97503 Gm17330-201ENSMUST00000221047 165 ntBASIC12.67□□□□□ -0.38
Nkx3-2P97503 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms