Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lig3P97386 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lig3P97386 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Lig3P97386 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lig3P97386 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lig3P97386 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lig3P97386 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.67□□□□□ -0.06
Lig3P97386 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lig3P97386 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lig3P97386 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.66□□□□□ -0.06
Lig3P97386 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.66□□□□□ -0.06
Lig3P97386 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Lig3P97386 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Lig3P97386 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.66□□□□□ -0.06
Lig3P97386 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Lig3P97386 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Lig3P97386 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Lig3P97386 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lig3P97386 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.65□□□□□ -0.06
Lig3P97386 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.65□□□□□ -0.06
Lig3P97386 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
Lig3P97386 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.65□□□□□ -0.06
Lig3P97386 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Gm11814-201ENSMUST00000119515 929 ntBASIC14.65□□□□□ -0.06
Lig3P97386 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.65□□□□□ -0.06
Lig3P97386 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Lig3P97386 Gm37230-201ENSMUST00000194491 818 ntBASIC14.65□□□□□ -0.06
Lig3P97386 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.65□□□□□ -0.06
Lig3P97386 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.65□□□□□ -0.06
Lig3P97386 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.65□□□□□ -0.06
Lig3P97386 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Lig3P97386 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Lig3P97386 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Lig3P97386 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lig3P97386 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Lig3P97386 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Lig3P97386 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.64□□□□□ -0.07
Lig3P97386 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Lig3P97386 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Lig3P97386 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.64□□□□□ -0.07
Lig3P97386 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.64□□□□□ -0.07
Lig3P97386 Gm27572-201ENSMUST00000183702 255 ntBASIC14.64□□□□□ -0.07
Lig3P97386 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 Olfr286-202ENSMUST00000205305 969 ntBASIC14.64□□□□□ -0.07
Lig3P97386 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lig3P97386 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.64□□□□□ -0.07
Lig3P97386 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.64□□□□□ -0.07
Lig3P97386 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Lig3P97386 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 354.2 ms