Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm5542-201ENSMUST00000195485 1089 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC8.86□□□□□ -0.99
PrkdcP97313 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
PrkdcP97313 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Gm13549-201ENSMUST00000118339 796 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm270-201ENSMUST00000223010 976 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
PrkdcP97313 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm18463-201ENSMUST00000207258 474 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Gm18460-201ENSMUST00000208088 464 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC8.86□□□□□ -0.99
PrkdcP97313 Gm7395-201ENSMUST00000216059 1045 ntBASIC8.86□□□□□ -0.99
PrkdcP97313 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PrkdcP97313 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC8.85□□□□□ -0.99
PrkdcP97313 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC8.85□□□□□ -0.99
PrkdcP97313 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Gm19680-201ENSMUST00000095050 1513 ntBASIC8.85□□□□□ -0.99
PrkdcP97313 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
PrkdcP97313 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
PrkdcP97313 Gm5621-201ENSMUST00000187303 640 ntBASIC8.85□□□□□ -0.99
PrkdcP97313 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC8.85□□□□□ -0.99
PrkdcP97313 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Aprt-ps-201ENSMUST00000212311 505 ntBASIC8.85□□□□□ -0.99
PrkdcP97313 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
PrkdcP97313 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC8.85□□□□□ -0.99
PrkdcP97313 Gm14999-201ENSMUST00000121039 624 ntBASIC8.85□□□□□ -0.99
PrkdcP97313 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
PrkdcP97313 Gm45500-201ENSMUST00000211676 803 ntBASIC8.85□□□□□ -0.99
PrkdcP97313 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC8.85□□□□□ -0.99
PrkdcP97313 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC8.85□□□□□ -0.99
PrkdcP97313 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
PrkdcP97313 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
PrkdcP97313 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
PrkdcP97313 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
PrkdcP97313 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC8.85□□□□□ -0.99
PrkdcP97313 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC8.85□□□□□ -0.99
PrkdcP97313 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC8.85□□□□□ -0.99
PrkdcP97313 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Gm45398-201ENSMUST00000210561 165 ntBASIC8.85□□□□□ -0.99
PrkdcP97313 Gm45527-201ENSMUST00000211052 774 ntBASIC8.85□□□□□ -0.99
PrkdcP97313 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
PrkdcP97313 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Gm5466-201ENSMUST00000119395 1890 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms