Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim43cP86449 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim43cP86449 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.58□□□□□ -0.08
Trim43cP86449 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim43cP86449 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim43cP86449 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trim43cP86449 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim43cP86449 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim43cP86449 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim43cP86449 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim43cP86449 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim43cP86449 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.57□□□□□ -0.08
Trim43cP86449 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim43cP86449 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim43cP86449 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Gm6447-201ENSMUST00000118905 835 ntBASIC14.57□□□□□ -0.08
Trim43cP86449 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trim43cP86449 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.57□□□□□ -0.08
Trim43cP86449 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.57□□□□□ -0.08
Trim43cP86449 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Gm44397-201ENSMUST00000195950 113 ntBASIC14.57□□□□□ -0.08
Trim43cP86449 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.57□□□□□ -0.08
Trim43cP86449 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim43cP86449 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.57□□□□□ -0.08
Trim43cP86449 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim43cP86449 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trim43cP86449 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim43cP86449 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.57□□□□□ -0.08
Trim43cP86449 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43cP86449 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim43cP86449 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
Trim43cP86449 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.56□□□□□ -0.08
Trim43cP86449 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 Gm15429-201ENSMUST00000151268 798 ntBASIC14.56□□□□□ -0.08
Trim43cP86449 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Gm18018-201ENSMUST00000198273 408 ntBASIC14.56□□□□□ -0.08
Trim43cP86449 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim43cP86449 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.56□□□□□ -0.08
Trim43cP86449 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim43cP86449 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim43cP86449 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim43cP86449 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim43cP86449 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43cP86449 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim43cP86449 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms