Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim43bP86448 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.81□□□□□ -0.2
Trim43bP86448 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim43bP86448 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.81□□□□□ -0.2
Trim43bP86448 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim43bP86448 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim43bP86448 Gm12585-201ENSMUST00000117307 290 ntBASIC13.81□□□□□ -0.2
Trim43bP86448 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trim43bP86448 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim43bP86448 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trim43bP86448 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim43bP86448 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Trim43bP86448 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim43bP86448 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim43bP86448 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim43bP86448 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Trim43bP86448 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43bP86448 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.8□□□□□ -0.2
Trim43bP86448 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trim43bP86448 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim43bP86448 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim43bP86448 Syt7-205ENSMUST00000224135 1557 ntBASIC13.8□□□□□ -0.2
Trim43bP86448 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.8□□□□□ -0.2
Trim43bP86448 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim43bP86448 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Gm15487-201ENSMUST00000122373 465 ntBASIC13.8□□□□□ -0.2
Trim43bP86448 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim43bP86448 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.8□□□□□ -0.2
Trim43bP86448 Gm28631-201ENSMUST00000190740 334 ntBASIC13.8□□□□□ -0.2
Trim43bP86448 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim43bP86448 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.8□□□□□ -0.2
Trim43bP86448 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim43bP86448 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim43bP86448 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim43bP86448 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43bP86448 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Trim43bP86448 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim43bP86448 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.79□□□□□ -0.2
Trim43bP86448 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim43bP86448 Gm7488-201ENSMUST00000117148 684 ntBASIC13.79□□□□□ -0.2
Trim43bP86448 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim43bP86448 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43bP86448 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43bP86448 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43bP86448 Gm29741-201ENSMUST00000192667 421 ntBASIC13.79□□□□□ -0.2
Trim43bP86448 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.79□□□□□ -0.2
Trim43bP86448 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.79□□□□□ -0.2
Trim43bP86448 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim43bP86448 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.79□□□□□ -0.2
Trim43bP86448 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim43bP86448 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms