Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
SgcbP82349 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SgcbP82349 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SgcbP82349 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
SgcbP82349 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SgcbP82349 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SgcbP82349 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
SgcbP82349 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
SgcbP82349 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SgcbP82349 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SgcbP82349 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.96□□□□□ -0.5
SgcbP82349 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
SgcbP82349 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SgcbP82349 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.95□□□□□ -0.5
SgcbP82349 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.95□□□□□ -0.5
SgcbP82349 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SgcbP82349 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
SgcbP82349 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Gm12928-201ENSMUST00000117115 573 ntBASIC11.95□□□□□ -0.5
SgcbP82349 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.95□□□□□ -0.5
SgcbP82349 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.95□□□□□ -0.5
SgcbP82349 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.95□□□□□ -0.5
SgcbP82349 Gm44397-201ENSMUST00000195950 113 ntBASIC11.95□□□□□ -0.5
SgcbP82349 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.95□□□□□ -0.5
SgcbP82349 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.95□□□□□ -0.5
SgcbP82349 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.95□□□□□ -0.5
SgcbP82349 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SgcbP82349 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.95□□□□□ -0.5
SgcbP82349 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SgcbP82349 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.95□□□□□ -0.5
SgcbP82349 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.95□□□□□ -0.5
SgcbP82349 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SgcbP82349 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SgcbP82349 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SgcbP82349 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Acot6-202ENSMUST00000222921 3622 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.94□□□□□ -0.5
SgcbP82349 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
SgcbP82349 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Gm12403-201ENSMUST00000121384 959 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.94□□□□□ -0.5
SgcbP82349 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.94□□□□□ -0.5
SgcbP82349 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.94□□□□□ -0.5
SgcbP82349 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SgcbP82349 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms