Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ldb1P70662 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ldb1P70662 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ldb1P70662 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.36□□□□□ -0.27
Ldb1P70662 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.36□□□□□ -0.27
Ldb1P70662 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Gm26464-201ENSMUST00000157094 305 ntBASIC13.36□□□□□ -0.27
Ldb1P70662 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ldb1P70662 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.36□□□□□ -0.27
Ldb1P70662 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.36□□□□□ -0.27
Ldb1P70662 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.36□□□□□ -0.27
Ldb1P70662 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ldb1P70662 Gm17330-201ENSMUST00000221047 165 ntBASIC13.36□□□□□ -0.27
Ldb1P70662 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.36□□□□□ -0.27
Ldb1P70662 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ldb1P70662 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ldb1P70662 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ldb1P70662 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Ldb1P70662 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ldb1P70662 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ldb1P70662 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ldb1P70662 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ldb1P70662 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Gm11524-201ENSMUST00000119349 807 ntBASIC13.35□□□□□ -0.27
Ldb1P70662 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.35□□□□□ -0.27
Ldb1P70662 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ldb1P70662 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Gm29608-201ENSMUST00000190444 463 ntBASIC13.35□□□□□ -0.27
Ldb1P70662 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ldb1P70662 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ldb1P70662 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ldb1P70662 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ldb1P70662 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.34□□□□□ -0.27
Ldb1P70662 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ldb1P70662 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ldb1P70662 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Ldb1P70662 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Ldb1P70662 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ldb1P70662 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.34□□□□□ -0.27
Ldb1P70662 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ldb1P70662 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms