Protein–RNA interactions for Protein: P70122

Sbds, Ribosome maturation protein SBDS, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SbdsP70122 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SbdsP70122 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SbdsP70122 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.02□□□□□ -0.16
SbdsP70122 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SbdsP70122 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.02□□□□□ -0.16
SbdsP70122 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SbdsP70122 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SbdsP70122 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SbdsP70122 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SbdsP70122 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SbdsP70122 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SbdsP70122 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SbdsP70122 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SbdsP70122 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SbdsP70122 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.02□□□□□ -0.17
SbdsP70122 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.02□□□□□ -0.17
SbdsP70122 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SbdsP70122 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SbdsP70122 Gm27680-201ENSMUST00000184192 160 ntBASIC14.02□□□□□ -0.17
SbdsP70122 Gm27772-201ENSMUST00000184900 187 ntBASIC14.02□□□□□ -0.17
SbdsP70122 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.02□□□□□ -0.17
SbdsP70122 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SbdsP70122 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SbdsP70122 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SbdsP70122 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.02□□□□□ -0.17
SbdsP70122 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.02□□□□□ -0.17
SbdsP70122 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SbdsP70122 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SbdsP70122 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SbdsP70122 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SbdsP70122 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SbdsP70122 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SbdsP70122 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SbdsP70122 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SbdsP70122 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SbdsP70122 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SbdsP70122 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Gm26308-201ENSMUST00000157768 69 ntBASIC14.01□□□□□ -0.17
SbdsP70122 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.01□□□□□ -0.17
SbdsP70122 Gm25948-201ENSMUST00000175334 112 ntBASIC14.01□□□□□ -0.17
SbdsP70122 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.01□□□□□ -0.17
SbdsP70122 Gm27702-201ENSMUST00000184512 56 ntBASIC14.01□□□□□ -0.17
SbdsP70122 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.01□□□□□ -0.17
SbdsP70122 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.01□□□□□ -0.17
SbdsP70122 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.01□□□□□ -0.17
SbdsP70122 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SbdsP70122 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.01□□□□□ -0.17
SbdsP70122 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.01□□□□□ -0.17
SbdsP70122 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SbdsP70122 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Gm10305-201ENSMUST00000195331 2475 ntBASIC14□□□□□ -0.17
SbdsP70122 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14□□□□□ -0.17
SbdsP70122 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14□□□□□ -0.17
SbdsP70122 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SbdsP70122 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14□□□□□ -0.17
SbdsP70122 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14□□□□□ -0.17
SbdsP70122 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Gm18905-201ENSMUST00000205454 928 ntBASIC14□□□□□ -0.17
SbdsP70122 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14□□□□□ -0.17
SbdsP70122 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14□□□□□ -0.17
SbdsP70122 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Gm44891-201ENSMUST00000208817 2223 ntBASIC14□□□□□ -0.17
SbdsP70122 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SbdsP70122 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SbdsP70122 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms