Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Crnkl1P63154 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Gm44335-201ENSMUST00000196879 141 ntBASIC13.26□□□□□ -0.29
Crnkl1P63154 Gm44297-201ENSMUST00000198304 141 ntBASIC13.26□□□□□ -0.29
Crnkl1P63154 Gm44346-201ENSMUST00000198851 141 ntBASIC13.26□□□□□ -0.29
Crnkl1P63154 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.26□□□□□ -0.29
Crnkl1P63154 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.26□□□□□ -0.29
Crnkl1P63154 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Crnkl1P63154 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Crnkl1P63154 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Crnkl1P63154 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Gm14701-201ENSMUST00000117156 348 ntBASIC13.25□□□□□ -0.29
Crnkl1P63154 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.25□□□□□ -0.29
Crnkl1P63154 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.25□□□□□ -0.29
Crnkl1P63154 Gm15483-201ENSMUST00000120338 456 ntBASIC13.25□□□□□ -0.29
Crnkl1P63154 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Mir6990-201ENSMUST00000183724 91 ntBASIC13.25□□□□□ -0.29
Crnkl1P63154 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Crnkl1P63154 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Crnkl1P63154 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Crnkl1P63154 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Crnkl1P63154 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Crnkl1P63154 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Crnkl1P63154 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Crnkl1P63154 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms