Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Gm11543-201ENSMUST00000120758 370 ntBASIC11.14□□□□□ -0.63
Lsm5P62322 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.14□□□□□ -0.63
Lsm5P62322 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Lsm5P62322 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.14□□□□□ -0.63
Lsm5P62322 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.14□□□□□ -0.63
Lsm5P62322 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.14□□□□□ -0.63
Lsm5P62322 Mir7071-201ENSMUST00000184847 69 ntBASIC11.14□□□□□ -0.63
Lsm5P62322 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.14□□□□□ -0.63
Lsm5P62322 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lsm5P62322 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.14□□□□□ -0.63
Lsm5P62322 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lsm5P62322 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lsm5P62322 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lsm5P62322 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.14□□□□□ -0.63
Lsm5P62322 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Lsm5P62322 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Lsm5P62322 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm5P62322 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Lsm5P62322 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm5P62322 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Gm11452-201ENSMUST00000122376 690 ntBASIC11.13□□□□□ -0.63
Lsm5P62322 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm5P62322 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.13□□□□□ -0.63
Lsm5P62322 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Lsm5P62322 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.13□□□□□ -0.63
Lsm5P62322 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm5P62322 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm5P62322 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.12□□□□□ -0.63
Lsm5P62322 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Lsm5P62322 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm5P62322 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lsm5P62322 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Matn2-203ENSMUST00000226766 3252 ntBASIC11.12□□□□□ -0.63
Lsm5P62322 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm5P62322 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.12□□□□□ -0.63
Lsm5P62322 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.12□□□□□ -0.63
Lsm5P62322 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.12□□□□□ -0.63
Lsm5P62322 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.12□□□□□ -0.63
Lsm5P62322 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm5P62322 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms