Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.83□□□□□ -0.68
Sssca1P56873 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.83□□□□□ -0.68
Sssca1P56873 Gm27741-201ENSMUST00000185060 237 ntBASIC10.83□□□□□ -0.68
Sssca1P56873 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.83□□□□□ -0.68
Sssca1P56873 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sssca1P56873 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.82□□□□□ -0.68
Sssca1P56873 Gm5264-201ENSMUST00000190584 848 ntBASIC10.82□□□□□ -0.68
Sssca1P56873 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.82□□□□□ -0.68
Sssca1P56873 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.82□□□□□ -0.68
Sssca1P56873 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sssca1P56873 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.82□□□□□ -0.68
Sssca1P56873 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.82□□□□□ -0.68
Sssca1P56873 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sssca1P56873 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sssca1P56873 Syt7-205ENSMUST00000224135 1557 ntBASIC10.82□□□□□ -0.68
Sssca1P56873 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.81□□□□□ -0.68
Sssca1P56873 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sssca1P56873 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Sssca1P56873 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sssca1P56873 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sssca1P56873 Gm13385-201ENSMUST00000121089 220 ntBASIC10.81□□□□□ -0.68
Sssca1P56873 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms