Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.26□□□□□ -0.13
NrlP54846 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.26□□□□□ -0.13
NrlP54846 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.26□□□□□ -0.13
NrlP54846 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NrlP54846 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NrlP54846 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NrlP54846 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NrlP54846 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.25□□□□□ -0.13
NrlP54846 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.25□□□□□ -0.13
NrlP54846 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Gm13369-201ENSMUST00000119442 987 ntBASIC14.25□□□□□ -0.13
NrlP54846 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.25□□□□□ -0.13
NrlP54846 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.25□□□□□ -0.13
NrlP54846 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Gm2445-201ENSMUST00000182798 989 ntBASIC14.25□□□□□ -0.13
NrlP54846 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Gm27501-201ENSMUST00000183599 107 ntBASIC14.25□□□□□ -0.13
NrlP54846 Gm37497-201ENSMUST00000195830 798 ntBASIC14.25□□□□□ -0.13
NrlP54846 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.25□□□□□ -0.13
NrlP54846 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Snora73a-201ENSMUST00000082453 205 ntBASIC14.25□□□□□ -0.13
NrlP54846 Gm10268-201ENSMUST00000085340 555 ntBASIC14.25□□□□□ -0.13
NrlP54846 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NrlP54846 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NrlP54846 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NrlP54846 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NrlP54846 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.24□□□□□ -0.13
NrlP54846 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.24□□□□□ -0.13
NrlP54846 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.24□□□□□ -0.13
NrlP54846 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm12403-201ENSMUST00000121384 959 ntBASIC14.24□□□□□ -0.13
NrlP54846 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.24□□□□□ -0.13
NrlP54846 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.24□□□□□ -0.13
NrlP54846 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.24□□□□□ -0.13
NrlP54846 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm26927-201ENSMUST00000182385 965 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm37922-201ENSMUST00000195596 455 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm42627-201ENSMUST00000197347 224 ntBASIC14.24□□□□□ -0.13
NrlP54846 Gm43822-201ENSMUST00000200285 476 ntBASIC14.24□□□□□ -0.13
NrlP54846 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NrlP54846 Gm45930-201ENSMUST00000221330 292 ntBASIC14.24□□□□□ -0.13
NrlP54846 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.24□□□□□ -0.13
NrlP54846 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.24□□□□□ -0.13
NrlP54846 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NrlP54846 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NrlP54846 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NrlP54846 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NrlP54846 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NrlP54846 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms