Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.17□□□□□ -0.14
Shmt1P50431 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.17□□□□□ -0.14
Shmt1P50431 Gm6447-201ENSMUST00000118905 835 ntBASIC14.17□□□□□ -0.14
Shmt1P50431 Gm24196-201ENSMUST00000179161 110 ntBASIC14.17□□□□□ -0.14
Shmt1P50431 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.17□□□□□ -0.14
Shmt1P50431 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Shmt1P50431 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.17□□□□□ -0.14
Shmt1P50431 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Shmt1P50431 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Shmt1P50431 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.17□□□□□ -0.14
Shmt1P50431 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Shmt1P50431 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt1P50431 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Shmt1P50431 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shmt1P50431 Gm14350-201ENSMUST00000116642 640 ntBASIC14.16□□□□□ -0.14
Shmt1P50431 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.16□□□□□ -0.14
Shmt1P50431 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.16□□□□□ -0.14
Shmt1P50431 Gm8810-201ENSMUST00000172895 754 ntBASIC14.16□□□□□ -0.14
Shmt1P50431 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.16□□□□□ -0.14
Shmt1P50431 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.16□□□□□ -0.14
Shmt1P50431 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.16□□□□□ -0.14
Shmt1P50431 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.16□□□□□ -0.14
Shmt1P50431 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.16□□□□□ -0.14
Shmt1P50431 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.16□□□□□ -0.14
Shmt1P50431 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Shmt1P50431 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.16□□□□□ -0.14
Shmt1P50431 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.16□□□□□ -0.14
Shmt1P50431 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.16□□□□□ -0.14
Shmt1P50431 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shmt1P50431 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.16□□□□□ -0.14
Shmt1P50431 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt1P50431 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Shmt1P50431 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.15□□□□□ -0.14
Shmt1P50431 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Shmt1P50431 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.15□□□□□ -0.14
Shmt1P50431 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Shmt1P50431 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Shmt1P50431 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Mir1982-201ENSMUST00000157368 74 ntBASIC14.15□□□□□ -0.14
Shmt1P50431 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.15□□□□□ -0.14
Shmt1P50431 AY702102-202ENSMUST00000194651 1173 ntBASIC14.15□□□□□ -0.14
Shmt1P50431 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Shmt1P50431 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.15□□□□□ -0.14
Shmt1P50431 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt1P50431 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Shmt1P50431 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Shmt1P50431 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Shmt1P50431 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt1P50431 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms