Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox2P48432 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sox2P48432 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.55□□□□□ -0.4
Sox2P48432 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Sox2P48432 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox2P48432 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sox2P48432 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Gm15678-201ENSMUST00000117573 960 ntBASIC12.55□□□□□ -0.4
Sox2P48432 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox2P48432 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.55□□□□□ -0.4
Sox2P48432 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sox2P48432 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox2P48432 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox2P48432 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.55□□□□□ -0.4
Sox2P48432 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.55□□□□□ -0.4
Sox2P48432 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Sox2P48432 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Sox2P48432 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sox2P48432 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox2P48432 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox2P48432 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox2P48432 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Gm25287-201ENSMUST00000103846 110 ntBASIC12.54□□□□□ -0.4
Sox2P48432 Gm22918-201ENSMUST00000103855 110 ntBASIC12.54□□□□□ -0.4
Sox2P48432 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Gm21470-201ENSMUST00000187680 696 ntBASIC12.54□□□□□ -0.4
Sox2P48432 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.54□□□□□ -0.4
Sox2P48432 Gm18206-201ENSMUST00000207027 926 ntBASIC12.54□□□□□ -0.4
Sox2P48432 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.54□□□□□ -0.4
Sox2P48432 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.54□□□□□ -0.4
Sox2P48432 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sox2P48432 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Sox2P48432 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sox2P48432 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox2P48432 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox2P48432 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.53□□□□□ -0.4
Sox2P48432 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox2P48432 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox2P48432 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sox2P48432 Gm15460-201ENSMUST00000118147 391 ntBASIC12.53□□□□□ -0.4
Sox2P48432 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.53□□□□□ -0.4
Sox2P48432 Gm13385-201ENSMUST00000121089 220 ntBASIC12.53□□□□□ -0.4
Sox2P48432 Mir1895-201ENSMUST00000122615 79 ntBASIC12.53□□□□□ -0.4
Sox2P48432 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox2P48432 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox2P48432 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox2P48432 Gm43125-201ENSMUST00000201724 730 ntBASIC12.53□□□□□ -0.4
Sox2P48432 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms