Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Gm11803-201ENSMUST00000119966 444 ntBASIC12.83□□□□□ -0.36
Tnfsf9P41274 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.83□□□□□ -0.36
Tnfsf9P41274 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf9P41274 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.82□□□□□ -0.36
Tnfsf9P41274 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm8213-201ENSMUST00000118191 441 ntBASIC12.82□□□□□ -0.36
Tnfsf9P41274 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm22331-201ENSMUST00000158066 136 ntBASIC12.82□□□□□ -0.36
Tnfsf9P41274 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm8810-201ENSMUST00000172895 754 ntBASIC12.82□□□□□ -0.36
Tnfsf9P41274 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm45784-201ENSMUST00000188360 142 ntBASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.82□□□□□ -0.36
Tnfsf9P41274 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tnfsf9P41274 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf9P41274 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Tnfsf9P41274 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.81□□□□□ -0.36
Tnfsf9P41274 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.81□□□□□ -0.36
Tnfsf9P41274 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf9P41274 Gm12742-201ENSMUST00000117326 410 ntBASIC12.81□□□□□ -0.36
Tnfsf9P41274 Gm13226-201ENSMUST00000117838 404 ntBASIC12.81□□□□□ -0.36
Tnfsf9P41274 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms