Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TfamP40630 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TfamP40630 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13□□□□□ -0.33
TfamP40630 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13□□□□□ -0.33
TfamP40630 Gm18905-201ENSMUST00000205454 928 ntBASIC13□□□□□ -0.33
TfamP40630 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Gm3695-201ENSMUST00000087222 1009 ntBASIC13□□□□□ -0.33
TfamP40630 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TfamP40630 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13□□□□□ -0.33
TfamP40630 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TfamP40630 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TfamP40630 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Gm37644-201ENSMUST00000192190 2270 ntBASIC13□□□□□ -0.33
TfamP40630 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TfamP40630 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.99□□□□□ -0.33
TfamP40630 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TfamP40630 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
TfamP40630 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.99□□□□□ -0.33
TfamP40630 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.99□□□□□ -0.33
TfamP40630 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
TfamP40630 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.99□□□□□ -0.33
TfamP40630 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.99□□□□□ -0.33
TfamP40630 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.99□□□□□ -0.33
TfamP40630 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TfamP40630 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.99□□□□□ -0.33
TfamP40630 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.98□□□□□ -0.33
TfamP40630 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.98□□□□□ -0.33
TfamP40630 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
TfamP40630 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.98□□□□□ -0.33
TfamP40630 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.98□□□□□ -0.33
TfamP40630 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TfamP40630 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.98□□□□□ -0.33
TfamP40630 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TfamP40630 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.98□□□□□ -0.33
TfamP40630 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.98□□□□□ -0.33
TfamP40630 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.98□□□□□ -0.33
TfamP40630 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TfamP40630 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms