Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm44397-201ENSMUST00000195950 113 ntBASIC13.22□□□□□ -0.29
HmgclP38060 Gm18018-201ENSMUST00000198273 408 ntBASIC13.22□□□□□ -0.29
HmgclP38060 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.22□□□□□ -0.29
HmgclP38060 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.22□□□□□ -0.29
HmgclP38060 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.22□□□□□ -0.29
HmgclP38060 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.22□□□□□ -0.29
HmgclP38060 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.22□□□□□ -0.29
HmgclP38060 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HmgclP38060 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HmgclP38060 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
HmgclP38060 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HmgclP38060 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HmgclP38060 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.22□□□□□ -0.29
HmgclP38060 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
HmgclP38060 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.21□□□□□ -0.29
HmgclP38060 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.21□□□□□ -0.29
HmgclP38060 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
HmgclP38060 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HmgclP38060 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.21□□□□□ -0.29
HmgclP38060 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.21□□□□□ -0.29
HmgclP38060 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.21□□□□□ -0.29
HmgclP38060 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.21□□□□□ -0.29
HmgclP38060 Gm15429-201ENSMUST00000151268 798 ntBASIC13.21□□□□□ -0.29
HmgclP38060 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.21□□□□□ -0.29
HmgclP38060 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.29
HmgclP38060 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.21□□□□□ -0.29
HmgclP38060 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.21□□□□□ -0.29
HmgclP38060 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HmgclP38060 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HmgclP38060 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.21□□□□□ -0.29
HmgclP38060 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HmgclP38060 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HmgclP38060 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HmgclP38060 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HmgclP38060 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HmgclP38060 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HmgclP38060 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HmgclP38060 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HmgclP38060 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.21□□□□□ -0.3
HmgclP38060 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
HmgclP38060 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.2□□□□□ -0.3
HmgclP38060 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HmgclP38060 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.2□□□□□ -0.3
HmgclP38060 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.2□□□□□ -0.3
HmgclP38060 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.2□□□□□ -0.3
HmgclP38060 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.2□□□□□ -0.3
HmgclP38060 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HmgclP38060 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
HmgclP38060 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HmgclP38060 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms