Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox5P35710 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sox5P35710 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox5P35710 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox5P35710 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox5P35710 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.65□□□□□ -0.06
Sox5P35710 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox5P35710 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.64□□□□□ -0.07
Sox5P35710 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.64□□□□□ -0.07
Sox5P35710 Gm25948-201ENSMUST00000175334 112 ntBASIC14.64□□□□□ -0.07
Sox5P35710 Gm18905-201ENSMUST00000205454 928 ntBASIC14.64□□□□□ -0.07
Sox5P35710 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.64□□□□□ -0.07
Sox5P35710 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sox5P35710 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sox5P35710 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox5P35710 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Sox5P35710 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Sox5P35710 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.63□□□□□ -0.07
Sox5P35710 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sox5P35710 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
Sox5P35710 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox5P35710 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sox5P35710 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.63□□□□□ -0.07
Sox5P35710 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox5P35710 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sox5P35710 Gm8396-201ENSMUST00000057361 823 ntBASIC14.63□□□□□ -0.07
Sox5P35710 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sox5P35710 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sox5P35710 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sox5P35710 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox5P35710 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Sox5P35710 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox5P35710 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox5P35710 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox5P35710 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.62□□□□□ -0.07
Sox5P35710 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Sox5P35710 Gm27772-201ENSMUST00000184900 187 ntBASIC14.62□□□□□ -0.07
Sox5P35710 Gm2756-201ENSMUST00000195851 400 ntBASIC14.62□□□□□ -0.07
Sox5P35710 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms