Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Slc6a1P31648 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Gm44608-201ENSMUST00000206827 855 ntBASIC11.54□□□□□ -0.56
Slc6a1P31648 Gm18057-201ENSMUST00000208220 503 ntBASIC11.54□□□□□ -0.56
Slc6a1P31648 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Slc6a1P31648 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Slc6a1P31648 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Slc6a1P31648 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Slc6a1P31648 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Gm25287-201ENSMUST00000103846 110 ntBASIC11.53□□□□□ -0.56
Slc6a1P31648 Gm22918-201ENSMUST00000103855 110 ntBASIC11.53□□□□□ -0.56
Slc6a1P31648 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Gm16198-201ENSMUST00000118766 670 ntBASIC11.53□□□□□ -0.56
Slc6a1P31648 Gm11543-201ENSMUST00000120758 370 ntBASIC11.53□□□□□ -0.56
Slc6a1P31648 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Slc6a1P31648 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Slc6a1P31648 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Slc6a1P31648 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc6a1P31648 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc6a1P31648 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.52□□□□□ -0.56
Slc6a1P31648 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc6a1P31648 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc6a1P31648 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Slc6a1P31648 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc6a1P31648 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc6a1P31648 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Slc6a1P31648 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.52□□□□□ -0.56
Slc6a1P31648 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Slc6a1P31648 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc6a1P31648 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.52□□□□□ -0.56
Slc6a1P31648 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Slc6a1P31648 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc6a1P31648 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc6a1P31648 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc6a1P31648 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Slc6a1P31648 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc6a1P31648 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc6a1P31648 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.52□□□□□ -0.57
Slc6a1P31648 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.52□□□□□ -0.57
Slc6a1P31648 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
Slc6a1P31648 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Slc6a1P31648 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.52□□□□□ -0.57
Slc6a1P31648 Gm18889-201ENSMUST00000174284 929 ntBASIC11.52□□□□□ -0.57
Slc6a1P31648 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.52□□□□□ -0.57
Slc6a1P31648 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.52□□□□□ -0.57
Slc6a1P31648 Mir6990-201ENSMUST00000183724 91 ntBASIC11.52□□□□□ -0.57
Slc6a1P31648 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms