Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vcam1P29533 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vcam1P29533 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Gm15370-201ENSMUST00000117158 253 ntBASIC15.32■□□□□ 0.04
Vcam1P29533 Gm13297-201ENSMUST00000120205 934 ntBASIC15.32■□□□□ 0.04
Vcam1P29533 Gm24548-201ENSMUST00000158650 108 ntBASIC15.32■□□□□ 0.04
Vcam1P29533 Gm17208-201ENSMUST00000168388 535 ntBASIC15.32■□□□□ 0.04
Vcam1P29533 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.32■□□□□ 0.04
Vcam1P29533 Gm6621-201ENSMUST00000193251 772 ntBASIC15.32■□□□□ 0.04
Vcam1P29533 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.32■□□□□ 0.04
Vcam1P29533 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vcam1P29533 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Vcam1P29533 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vcam1P29533 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Vcam1P29533 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Vcam1P29533 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vcam1P29533 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vcam1P29533 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Vcam1P29533 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.31■□□□□ 0.04
Vcam1P29533 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vcam1P29533 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Vcam1P29533 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.31■□□□□ 0.04
Vcam1P29533 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Gm22323-201ENSMUST00000103832 109 ntBASIC15.31■□□□□ 0.04
Vcam1P29533 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vcam1P29533 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vcam1P29533 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Gm44364-201ENSMUST00000198368 141 ntBASIC15.31■□□□□ 0.04
Vcam1P29533 Gm18584-201ENSMUST00000203098 964 ntBASIC15.31■□□□□ 0.04
Vcam1P29533 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.31■□□□□ 0.04
Vcam1P29533 Gm5781-201ENSMUST00000219792 443 ntBASIC15.31■□□□□ 0.04
Vcam1P29533 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.31■□□□□ 0.04
Vcam1P29533 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vcam1P29533 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcam1P29533 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vcam1P29533 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Vcam1P29533 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.3■□□□□ 0.04
Vcam1P29533 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vcam1P29533 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vcam1P29533 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vcam1P29533 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vcam1P29533 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vcam1P29533 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vcam1P29533 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.3■□□□□ 0.04
Vcam1P29533 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vcam1P29533 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.3■□□□□ 0.04
Vcam1P29533 Gm2991-201ENSMUST00000173338 480 ntBASIC15.3■□□□□ 0.04
Vcam1P29533 Gm27243-201ENSMUST00000183964 521 ntBASIC15.3■□□□□ 0.04
Vcam1P29533 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms