Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.12□□□□□ -0.47
Cd40P27512 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cd40P27512 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.12□□□□□ -0.47
Cd40P27512 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.12□□□□□ -0.47
Cd40P27512 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.12□□□□□ -0.47
Cd40P27512 Gm6745-201ENSMUST00000199216 526 ntBASIC12.12□□□□□ -0.47
Cd40P27512 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.12□□□□□ -0.47
Cd40P27512 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.12□□□□□ -0.47
Cd40P27512 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Gm18473-201ENSMUST00000220543 868 ntBASIC12.12□□□□□ -0.47
Cd40P27512 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.12□□□□□ -0.47
Cd40P27512 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.12□□□□□ -0.47
Cd40P27512 Itm2b-204ENSMUST00000228637 783 ntBASIC12.12□□□□□ -0.47
Cd40P27512 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.12□□□□□ -0.47
Cd40P27512 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.12□□□□□ -0.47
Cd40P27512 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Acot6-202ENSMUST00000222921 3622 ntBASIC12.12□□□□□ -0.47
Cd40P27512 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40P27512 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cd40P27512 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.11□□□□□ -0.47
Cd40P27512 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cd40P27512 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Gm12928-201ENSMUST00000117115 573 ntBASIC12.11□□□□□ -0.47
Cd40P27512 Gm5687-201ENSMUST00000118252 640 ntBASIC12.11□□□□□ -0.47
Cd40P27512 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Gm11918-201ENSMUST00000121660 179 ntBASIC12.11□□□□□ -0.47
Cd40P27512 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.11□□□□□ -0.47
Cd40P27512 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.11□□□□□ -0.47
Cd40P27512 Gm9908-201ENSMUST00000211534 448 ntBASIC12.11□□□□□ -0.47
Cd40P27512 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.11□□□□□ -0.47
Cd40P27512 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.11□□□□□ -0.47
Cd40P27512 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.11□□□□□ -0.47
Cd40P27512 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cd40P27512 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cd40P27512 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.11□□□□□ -0.47
Cd40P27512 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40P27512 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.11□□□□□ -0.47
Cd40P27512 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.1□□□□□ -0.47
Cd40P27512 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.1□□□□□ -0.47
Cd40P27512 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cd40P27512 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40P27512 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms