Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl1P12850 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.1□□□□□ -0.63
Cxcl1P12850 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.1□□□□□ -0.63
Cxcl1P12850 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl1P12850 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl1P12850 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl1P12850 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.09□□□□□ -0.63
Cxcl1P12850 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.09□□□□□ -0.63
Cxcl1P12850 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cxcl1P12850 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.09□□□□□ -0.63
Cxcl1P12850 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.09□□□□□ -0.63
Cxcl1P12850 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl1P12850 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.09□□□□□ -0.63
Cxcl1P12850 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.09□□□□□ -0.63
Cxcl1P12850 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl1P12850 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl1P12850 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cxcl1P12850 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.08□□□□□ -0.64
Cxcl1P12850 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.08□□□□□ -0.64
Cxcl1P12850 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.08□□□□□ -0.64
Cxcl1P12850 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms