Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl1P10146 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl1P10146 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl1P10146 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl1P10146 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Ccl1P10146 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Gm27628-201ENSMUST00000184911 107 ntBASIC10.37□□□□□ -0.75
Ccl1P10146 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl1P10146 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.37□□□□□ -0.75
Ccl1P10146 Gm18027-201ENSMUST00000218947 619 ntBASIC10.37□□□□□ -0.75
Ccl1P10146 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.37□□□□□ -0.75
Ccl1P10146 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl1P10146 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl1P10146 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl1P10146 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Ccl1P10146 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.37□□□□□ -0.75
Ccl1P10146 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.37□□□□□ -0.75
Ccl1P10146 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl1P10146 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl1P10146 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl1P10146 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Ccl1P10146 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.36□□□□□ -0.75
Ccl1P10146 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.36□□□□□ -0.75
Ccl1P10146 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Mir874-201ENSMUST00000104769 76 ntBASIC10.36□□□□□ -0.75
Ccl1P10146 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.36□□□□□ -0.75
Ccl1P10146 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl1P10146 Gm11543-201ENSMUST00000120758 370 ntBASIC10.36□□□□□ -0.75
Ccl1P10146 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.36□□□□□ -0.75
Ccl1P10146 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl1P10146 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl1P10146 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl1P10146 Gm10060-201ENSMUST00000212002 111 ntBASIC10.36□□□□□ -0.75
Ccl1P10146 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.36□□□□□ -0.75
Ccl1P10146 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl1P10146 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl1P10146 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.36□□□□□ -0.75
Ccl1P10146 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ccl1P10146 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.36□□□□□ -0.75
Ccl1P10146 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl1P10146 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms