Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp6P0C0A3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gm43094-201ENSMUST00000196549 921 ntBASIC14.61□□□□□ -0.07
Chmp6P0C0A3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gm18041-201ENSMUST00000218210 618 ntBASIC14.61□□□□□ -0.07
Chmp6P0C0A3 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.61□□□□□ -0.07
Chmp6P0C0A3 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gm18624-201ENSMUST00000220966 658 ntBASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp6P0C0A3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.61□□□□□ -0.07
Chmp6P0C0A3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Gm15823-201ENSMUST00000064305 670 ntBASIC14.6□□□□□ -0.07
Chmp6P0C0A3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp6P0C0A3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms