Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Col4a2P08122 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm14109-201ENSMUST00000118814 309 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm13570-201ENSMUST00000140763 309 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Col4a2P08122 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.23□□□□□ -0.45
Col4a2P08122 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm11531-201ENSMUST00000117614 555 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Gm4909-201ENSMUST00000118749 794 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 B9d1os-201ENSMUST00000137010 674 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Mir5120-201ENSMUST00000175020 78 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.23□□□□□ -0.45
Col4a2P08122 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col4a2P08122 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col4a2P08122 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col4a2P08122 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col4a2P08122 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col4a2P08122 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col4a2P08122 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a2P08122 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a2P08122 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.22□□□□□ -0.45
Col4a2P08122 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.22□□□□□ -0.45
Col4a2P08122 Gm27046-201ENSMUST00000182160 463 ntBASIC12.22□□□□□ -0.45
Col4a2P08122 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.22□□□□□ -0.45
Col4a2P08122 Gm13097-201ENSMUST00000210722 397 ntBASIC12.22□□□□□ -0.45
Col4a2P08122 Gm29787-201ENSMUST00000222129 849 ntBASIC12.22□□□□□ -0.45
Col4a2P08122 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a2P08122 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.21□□□□□ -0.45
Col4a2P08122 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col4a2P08122 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.21□□□□□ -0.45
Col4a2P08122 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Col4a2P08122 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col4a2P08122 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms