Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm27375-201ENSMUST00000183799 107 ntBASIC13.18□□□□□ -0.3
Hoxa4P06798 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.18□□□□□ -0.3
Hoxa4P06798 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.18□□□□□ -0.3
Hoxa4P06798 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Hoxa4P06798 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.18□□□□□ -0.3
Hoxa4P06798 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.18□□□□□ -0.3
Hoxa4P06798 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxa4P06798 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.18□□□□□ -0.3
Hoxa4P06798 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hoxa4P06798 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxa4P06798 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxa4P06798 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.17□□□□□ -0.3
Hoxa4P06798 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.17□□□□□ -0.3
Hoxa4P06798 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxa4P06798 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxa4P06798 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.17□□□□□ -0.3
Hoxa4P06798 Gm11978-201ENSMUST00000122315 466 ntBASIC13.17□□□□□ -0.3
Hoxa4P06798 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxa4P06798 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.17□□□□□ -0.3
Hoxa4P06798 Gm18187-201ENSMUST00000196476 984 ntBASIC13.17□□□□□ -0.3
Hoxa4P06798 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.17□□□□□ -0.3
Hoxa4P06798 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxa4P06798 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxa4P06798 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hoxa4P06798 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa4P06798 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxa4P06798 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Hoxa4P06798 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm11618-201ENSMUST00000117946 267 ntBASIC13.16□□□□□ -0.3
Hoxa4P06798 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hoxa4P06798 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm8602-201ENSMUST00000184045 607 ntBASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm29649-201ENSMUST00000185649 419 ntBASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxa4P06798 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.16□□□□□ -0.3
Hoxa4P06798 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.16□□□□□ -0.3
Hoxa4P06798 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.16□□□□□ -0.3
Hoxa4P06798 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxa4P06798 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms