Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Gm15678-201ENSMUST00000117573 960 ntBASIC9.4□□□□□ -0.9
Hbb-b1P02088 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Gm11950-201ENSMUST00000121615 838 ntBASIC9.4□□□□□ -0.9
Hbb-b1P02088 Gm27867-201ENSMUST00000184778 125 ntBASIC9.4□□□□□ -0.9
Hbb-b1P02088 Gm29741-201ENSMUST00000192667 421 ntBASIC9.4□□□□□ -0.9
Hbb-b1P02088 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.4□□□□□ -0.9
Hbb-b1P02088 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.4□□□□□ -0.9
Hbb-b1P02088 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hbb-b1P02088 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Hbb-b1P02088 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hbb-b1P02088 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hbb-b1P02088 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hbb-b1P02088 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hbb-b1P02088 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hbb-b1P02088 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Hbb-b1P02088 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Hbb-b1P02088 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Hbb-b1P02088 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hbb-b1P02088 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.4□□□□□ -0.91
Hbb-b1P02088 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.4□□□□□ -0.91
Hbb-b1P02088 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hbb-b1P02088 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.39□□□□□ -0.91
Hbb-b1P02088 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.39□□□□□ -0.91
Hbb-b1P02088 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.39□□□□□ -0.91
Hbb-b1P02088 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.39□□□□□ -0.91
Hbb-b1P02088 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hbb-b1P02088 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hbb-b1P02088 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.38□□□□□ -0.91
Hbb-b1P02088 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.38□□□□□ -0.91
Hbb-b1P02088 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.38□□□□□ -0.91
Hbb-b1P02088 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hbb-b1P02088 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hbb-b1P02088 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hbb-b1P02088 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hbb-b1P02088 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hbb-b1P02088 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Hbb-b1P02088 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hbb-b1P02088 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Hbb-b1P02088 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.38□□□□□ -0.91
Hbb-b1P02088 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hbb-b1P02088 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Hbb-b1P02088 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms