Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Matn4O89029 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Gm25948-201ENSMUST00000175334 112 ntBASIC12.66□□□□□ -0.38
Matn4O89029 Gm27680-201ENSMUST00000184192 160 ntBASIC12.66□□□□□ -0.38
Matn4O89029 Gm27321-201ENSMUST00000185021 205 ntBASIC12.66□□□□□ -0.38
Matn4O89029 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.66□□□□□ -0.38
Matn4O89029 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.66□□□□□ -0.38
Matn4O89029 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.66□□□□□ -0.38
Matn4O89029 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Matn4O89029 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Matn4O89029 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn4O89029 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.65□□□□□ -0.38
Matn4O89029 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Matn4O89029 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.65□□□□□ -0.38
Matn4O89029 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.65□□□□□ -0.38
Matn4O89029 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.65□□□□□ -0.38
Matn4O89029 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Matn4O89029 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.65□□□□□ -0.38
Matn4O89029 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.65□□□□□ -0.38
Matn4O89029 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Matn4O89029 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.65□□□□□ -0.38
Matn4O89029 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Matn4O89029 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.65□□□□□ -0.38
Matn4O89029 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn4O89029 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.65□□□□□ -0.38
Matn4O89029 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Matn4O89029 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Matn4O89029 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.65□□□□□ -0.39
Matn4O89029 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Matn4O89029 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Matn4O89029 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Matn4O89029 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.64□□□□□ -0.39
Matn4O89029 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Matn4O89029 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Matn4O89029 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Matn4O89029 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Gm12403-201ENSMUST00000121384 959 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.64□□□□□ -0.39
Matn4O89029 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.64□□□□□ -0.39
Matn4O89029 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Matn4O89029 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.64□□□□□ -0.39
Matn4O89029 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Matn4O89029 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn4O89029 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Matn4O89029 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms