Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Hcn1O88704 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.87□□□□□ -0.35
Hcn1O88704 Gm5425-201ENSMUST00000214125 459 ntBASIC12.87□□□□□ -0.35
Hcn1O88704 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Gm9797-201ENSMUST00000052902 613 ntBASIC12.87□□□□□ -0.35
Hcn1O88704 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hcn1O88704 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.87□□□□□ -0.35
Hcn1O88704 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.87□□□□□ -0.35
Hcn1O88704 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.86□□□□□ -0.35
Hcn1O88704 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Hcn1O88704 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.86□□□□□ -0.35
Hcn1O88704 Gm42612-201ENSMUST00000197986 623 ntBASIC12.86□□□□□ -0.35
Hcn1O88704 Gm43170-201ENSMUST00000199827 612 ntBASIC12.86□□□□□ -0.35
Hcn1O88704 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.86□□□□□ -0.35
Hcn1O88704 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.86□□□□□ -0.35
Hcn1O88704 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.86□□□□□ -0.35
Hcn1O88704 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hcn1O88704 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hcn1O88704 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.86□□□□□ -0.35
Hcn1O88704 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hcn1O88704 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.86□□□□□ -0.35
Hcn1O88704 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hcn1O88704 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Hcn1O88704 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.85□□□□□ -0.35
Hcn1O88704 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hcn1O88704 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.85□□□□□ -0.35
Hcn1O88704 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.85□□□□□ -0.35
Hcn1O88704 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.85□□□□□ -0.35
Hcn1O88704 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Hcn1O88704 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Hcn1O88704 Gm28760-201ENSMUST00000185995 736 ntBASIC12.85□□□□□ -0.35
Hcn1O88704 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.85□□□□□ -0.35
Hcn1O88704 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hcn1O88704 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.85□□□□□ -0.35
Hcn1O88704 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms