Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vti1bO88384 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Vti1bO88384 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vti1bO88384 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vti1bO88384 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.81□□□□□ -0.36
Vti1bO88384 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vti1bO88384 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vti1bO88384 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vti1bO88384 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vti1bO88384 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Vti1bO88384 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.8□□□□□ -0.36
Vti1bO88384 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Gm2445-201ENSMUST00000182798 989 ntBASIC12.8□□□□□ -0.36
Vti1bO88384 Gm27989-201ENSMUST00000184721 107 ntBASIC12.8□□□□□ -0.36
Vti1bO88384 Gm37714-201ENSMUST00000194742 342 ntBASIC12.8□□□□□ -0.36
Vti1bO88384 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.8□□□□□ -0.36
Vti1bO88384 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.8□□□□□ -0.36
Vti1bO88384 Gm18027-201ENSMUST00000218947 619 ntBASIC12.8□□□□□ -0.36
Vti1bO88384 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vti1bO88384 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vti1bO88384 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vti1bO88384 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vti1bO88384 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vti1bO88384 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vti1bO88384 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vti1bO88384 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vti1bO88384 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vti1bO88384 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vti1bO88384 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.79□□□□□ -0.36
Vti1bO88384 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vti1bO88384 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.79□□□□□ -0.36
Vti1bO88384 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Vti1bO88384 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.79□□□□□ -0.36
Vti1bO88384 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Mir7023-201ENSMUST00000185093 64 ntBASIC12.79□□□□□ -0.36
Vti1bO88384 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.79□□□□□ -0.36
Vti1bO88384 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.79□□□□□ -0.36
Vti1bO88384 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vti1bO88384 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.79□□□□□ -0.36
Vti1bO88384 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vti1bO88384 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.79□□□□□ -0.36
Vti1bO88384 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.79□□□□□ -0.36
Vti1bO88384 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vti1bO88384 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.78□□□□□ -0.36
Vti1bO88384 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms