Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nid2O88322 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Gm43908-201ENSMUST00000205074 1472 ntBASIC17.19■□□□□ 0.34
Nid2O88322 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nid2O88322 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.19■□□□□ 0.34
Nid2O88322 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nid2O88322 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Nid2O88322 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nid2O88322 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC17.19■□□□□ 0.34
Nid2O88322 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Nid2O88322 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.19■□□□□ 0.34
Nid2O88322 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nid2O88322 Gm5884-201ENSMUST00000036712 1479 ntBASIC17.19■□□□□ 0.34
Nid2O88322 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Nid2O88322 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 CU062626.3-201ENSMUST00000225522 1411 ntBASIC17.18■□□□□ 0.34
Nid2O88322 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC17.18■□□□□ 0.34
Nid2O88322 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Gm15782-201ENSMUST00000121073 445 ntBASIC17.18■□□□□ 0.34
Nid2O88322 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC17.18■□□□□ 0.34
Nid2O88322 Mir1943-201ENSMUST00000158276 73 ntBASIC17.18■□□□□ 0.34
Nid2O88322 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nid2O88322 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nid2O88322 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC17.18■□□□□ 0.34
Nid2O88322 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Nid2O88322 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nid2O88322 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.17■□□□□ 0.34
Nid2O88322 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Nid2O88322 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC17.17■□□□□ 0.34
Nid2O88322 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC17.17■□□□□ 0.34
Nid2O88322 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC17.17■□□□□ 0.34
Nid2O88322 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC17.17■□□□□ 0.34
Nid2O88322 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Nid2O88322 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.17■□□□□ 0.34
Nid2O88322 Mir7032-201ENSMUST00000185154 79 ntBASIC17.17■□□□□ 0.34
Nid2O88322 AC154680.1-201ENSMUST00000224376 859 ntBASIC17.17■□□□□ 0.34
Nid2O88322 CT025694.1-201ENSMUST00000226188 934 ntBASIC17.17■□□□□ 0.34
Nid2O88322 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nid2O88322 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Nid2O88322 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nid2O88322 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nid2O88322 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nid2O88322 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nid2O88322 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nid2O88322 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms