Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Gm5187-201ENSMUST00000117317 991 ntBASIC11.31□□□□□ -0.6
Cxcl13O55038 Gm13123-201ENSMUST00000122173 492 ntBASIC11.31□□□□□ -0.6
Cxcl13O55038 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.31□□□□□ -0.6
Cxcl13O55038 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl13O55038 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl13O55038 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl13O55038 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.3□□□□□ -0.6
Cxcl13O55038 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Gm23931-201ENSMUST00000103842 109 ntBASIC11.3□□□□□ -0.6
Cxcl13O55038 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.3□□□□□ -0.6
Cxcl13O55038 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl13O55038 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.3□□□□□ -0.6
Cxcl13O55038 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl13O55038 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Cxcl13O55038 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Cxcl13O55038 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cxcl13O55038 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl13O55038 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.29□□□□□ -0.6
Cxcl13O55038 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl13O55038 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl13O55038 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cxcl13O55038 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cxcl13O55038 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl13O55038 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl13O55038 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.29□□□□□ -0.6
Cxcl13O55038 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl13O55038 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.29□□□□□ -0.6
Cxcl13O55038 Gm26927-201ENSMUST00000182385 965 ntBASIC11.29□□□□□ -0.6
Cxcl13O55038 Gm45331-201ENSMUST00000209868 554 ntBASIC11.29□□□□□ -0.6
Cxcl13O55038 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.29□□□□□ -0.6
Cxcl13O55038 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl13O55038 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl13O55038 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcl13O55038 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms