Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.16□□□□□ -0.46
Rnf13O54965 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf13O54965 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.16□□□□□ -0.46
Rnf13O54965 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.16□□□□□ -0.46
Rnf13O54965 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf13O54965 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf13O54965 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf13O54965 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Gm22065-201ENSMUST00000103753 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm22066-201ENSMUST00000103761 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm24932-201ENSMUST00000103763 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm24115-201ENSMUST00000103799 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm22190-201ENSMUST00000103827 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm22191-201ENSMUST00000103831 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm24721-201ENSMUST00000103849 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm28018-201ENSMUST00000103869 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm26399-201ENSMUST00000103937 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf13O54965 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf13O54965 Gm25349-201ENSMUST00000177728 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm23616-201ENSMUST00000177797 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm25871-201ENSMUST00000177816 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm24752-201ENSMUST00000178240 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm24496-201ENSMUST00000178287 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm25649-201ENSMUST00000178476 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm25548-201ENSMUST00000178681 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm23147-201ENSMUST00000178841 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm26095-201ENSMUST00000179270 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm22171-201ENSMUST00000179283 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm23936-201ENSMUST00000179354 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm22619-201ENSMUST00000179516 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm25255-201ENSMUST00000179579 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm24755-201ENSMUST00000179691 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm26506-201ENSMUST00000179692 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm25086-201ENSMUST00000179931 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm23243-201ENSMUST00000180047 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm24659-201ENSMUST00000180212 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm24169-201ENSMUST00000180244 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm23689-201ENSMUST00000180354 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf13O54965 Gm27359-201ENSMUST00000184153 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm27785-201ENSMUST00000184268 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm27466-201ENSMUST00000184396 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm27703-201ENSMUST00000184836 110 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf13O54965 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.15□□□□□ -0.46
Rnf13O54965 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Rnf13O54965 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rnf13O54965 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rnf13O54965 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.15□□□□□ -0.46
Rnf13O54965 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf13O54965 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf13O54965 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf13O54965 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf13O54965 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf13O54965 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf13O54965 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf13O54965 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf13O54965 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf13O54965 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf13O54965 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms