Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.2□□□□□ -0.14
Itgb3O54890 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Itgb3O54890 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Gm10156-201ENSMUST00000122364 462 ntBASIC14.2□□□□□ -0.14
Itgb3O54890 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.2□□□□□ -0.14
Itgb3O54890 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.2□□□□□ -0.14
Itgb3O54890 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.2□□□□□ -0.14
Itgb3O54890 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.2□□□□□ -0.14
Itgb3O54890 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.2□□□□□ -0.14
Itgb3O54890 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Itgb3O54890 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.2□□□□□ -0.14
Itgb3O54890 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Itgb3O54890 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Itgb3O54890 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.19□□□□□ -0.14
Itgb3O54890 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Itgb3O54890 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Itgb3O54890 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Gm8213-201ENSMUST00000118191 441 ntBASIC14.19□□□□□ -0.14
Itgb3O54890 Gm24644-201ENSMUST00000157114 139 ntBASIC14.19□□□□□ -0.14
Itgb3O54890 Gm22331-201ENSMUST00000158066 136 ntBASIC14.19□□□□□ -0.14
Itgb3O54890 Gm29649-201ENSMUST00000185649 419 ntBASIC14.19□□□□□ -0.14
Itgb3O54890 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.19□□□□□ -0.14
Itgb3O54890 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.19□□□□□ -0.14
Itgb3O54890 Gm18062-201ENSMUST00000208020 547 ntBASIC14.19□□□□□ -0.14
Itgb3O54890 Gm18055-201ENSMUST00000208254 547 ntBASIC14.19□□□□□ -0.14
Itgb3O54890 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.19□□□□□ -0.14
Itgb3O54890 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.19□□□□□ -0.14
Itgb3O54890 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Itgb3O54890 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.19□□□□□ -0.14
Itgb3O54890 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Itgb3O54890 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Itgb3O54890 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.18□□□□□ -0.14
Itgb3O54890 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.18□□□□□ -0.14
Itgb3O54890 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Itgb3O54890 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.18□□□□□ -0.14
Itgb3O54890 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Gm14350-201ENSMUST00000116642 640 ntBASIC14.18□□□□□ -0.14
Itgb3O54890 Gm6447-201ENSMUST00000118905 835 ntBASIC14.18□□□□□ -0.14
Itgb3O54890 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.18□□□□□ -0.14
Itgb3O54890 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.18□□□□□ -0.14
Itgb3O54890 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.18□□□□□ -0.14
Itgb3O54890 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.18□□□□□ -0.14
Itgb3O54890 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Itgb3O54890 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Itgb3O54890 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Itgb3O54890 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Itgb3O54890 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.17□□□□□ -0.14
Itgb3O54890 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Itgb3O54890 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.17□□□□□ -0.14
Itgb3O54890 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms